karyoploteR - Plot customizable linear genomes displaying arbitrary data
karyoploteR creates karyotype plots of arbitrary genomes and offers a complete set of functions to plot arbitrary data on them. It mimicks many R base graphics functions coupling them with a coordinate change function automatically mapping the chromosome and data coordinates into the plot coordinates. In addition to the provided data plotting functions, it is easy to add new ones.
Last updated 4 months ago
visualizationcopynumbervariationsequencingcoveragednaseqchipseqmethylseqdataimportonechannel
294 stars 7.12 score 130 dependencies 4 dependentsCopyNumberPlots - Create Copy-Number Plots using karyoploteR functionality
CopyNumberPlots have a set of functions extending karyoploteRs functionality to create beautiful, customizable and flexible plots of copy-number related data.
Last updated 4 months ago
visualizationcopynumbervariationcoverageonechanneldataimportsequencingdnaseq
1.31 score 135 dependencies 2 dependents